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@ding-lab

Li Ding's Lab

Li Ding's Lab at the Washington University School of Medicine

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  1. msisensor msisensor Public archive

    microsatellite instability detection using tumor only or paired tumor-normal data

    C++ 132 54

  2. CharGer CharGer Public

    Characterization of Germline variants

    Python 100 37

  3. MuSiC2 MuSiC2 Public

    identifying mutational significance in cancer genomes

    Perl 62 20

  4. hotspot3d hotspot3d Public

    3D hotspot mutation proximity analysis tool

    Perl 52 26

  5. PanCanAtlasGermline PanCanAtlasGermline Public

    R 44 14

  6. GenomeVIP GenomeVIP Public

    PHP 20 5

Repositories

Showing 10 of 145 repositories
  • mCRC_publication Public
    ding-lab/mCRC_publication’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Feb 5, 2026
  • ffpefiltering Public

    Use MicroSec for FFPE filtering

    ding-lab/ffpefiltering’s past year of commit activity
    R 0 1 0 0 Updated Feb 5, 2026
  • VirusScan Public

    VirusScan Pipeline

    ding-lab/VirusScan’s past year of commit activity
    Perl 12 7 0 0 Updated Feb 5, 2026
  • FSAudit Public

    Filesystem audit visualization

    ding-lab/FSAudit’s past year of commit activity
    Shell 1 0 0 0 Updated Feb 4, 2026
  • rcwrapper Public

    calculate vaf for variants based on bam

    ding-lab/rcwrapper’s past year of commit activity
    Perl 0 0 0 0 Updated Jan 29, 2026
  • somaticwrapper Public

    Detect somatic variants from tumor and normal WGS/WXS data

    ding-lab/somaticwrapper’s past year of commit activity
    Perl 19 AGPL-3.0 9 1 0 Updated Jan 29, 2026
  • Long_read_RCC Public
    ding-lab/Long_read_RCC’s past year of commit activity
    0 0 0 0 Updated Jan 27, 2026
  • IRD Public
    ding-lab/IRD’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jan 19, 2026
  • SRescue Public

    Pipeline for SR-LR integration

    ding-lab/SRescue’s past year of commit activity
    Nextflow 0 0 0 0 Updated Jan 18, 2026
  • SVLover Public

    LOng read Variant ExploreR

    ding-lab/SVLover’s past year of commit activity
    Nextflow 0 0 0 0 Updated Jan 18, 2026
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